Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.13□□□□□ -0.15
LAMP1P11279 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 KRT18P25-201ENST00000508931 1278 ntBASIC14.13□□□□□ -0.15
LAMP1P11279 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 RN7SL204P-201ENST00000582831 262 ntBASIC14.13□□□□□ -0.15
LAMP1P11279 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 WFDC1-204ENST00000613603 549 ntBASIC14.13□□□□□ -0.15
LAMP1P11279 CU634019.7-201ENST00000624153 1185 ntBASIC14.13□□□□□ -0.15
LAMP1P11279 FP236241.2-201ENST00000624906 1185 ntBASIC14.13□□□□□ -0.15
LAMP1P11279 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.13□□□□□ -0.15
LAMP1P11279 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LAMP1P11279 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LAMP1P11279 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.13□□□□□ -0.15
LAMP1P11279 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.13□□□□□ -0.15
LAMP1P11279 KRT8P35-201ENST00000483942 1338 ntBASIC14.13□□□□□ -0.15
LAMP1P11279 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LAMP1P11279 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LAMP1P11279 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.12□□□□□ -0.15
LAMP1P11279 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.12□□□□□ -0.15
LAMP1P11279 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMP1P11279 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMP1P11279 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LAMP1P11279 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LAMP1P11279 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 FAM207CP-201ENST00000443486 507 ntBASIC14.12□□□□□ -0.15
LAMP1P11279 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMP1P11279 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.12□□□□□ -0.15
LAMP1P11279 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMP1P11279 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LAMP1P11279 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LAMP1P11279 MYADML-201ENST00000474610 2147 ntBASIC14.12□□□□□ -0.15
LAMP1P11279 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 AL138725.1-201ENST00000407347 1314 ntBASIC14.12□□□□□ -0.15
LAMP1P11279 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LAMP1P11279 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LAMP1P11279 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMP1P11279 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms