Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC007326.1-201ENST00000604539 458 ntBASIC21.22■□□□□ 0.99
CHGAP10645 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
CHGAP10645 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC21.22■□□□□ 0.99
CHGAP10645 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
CHGAP10645 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.22■□□□□ 0.99
CHGAP10645 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 R3HDM2P2-201ENST00000401880 2116 ntBASIC21.22■□□□□ 0.99
CHGAP10645 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC21.22■□□□□ 0.99
CHGAP10645 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHGAP10645 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHGAP10645 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.21■□□□□ 0.99
CHGAP10645 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC21.21■□□□□ 0.99
CHGAP10645 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC21.21■□□□□ 0.99
CHGAP10645 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CHGAP10645 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
CHGAP10645 KRT18P36-201ENST00000411618 1276 ntBASIC21.21■□□□□ 0.99
CHGAP10645 AL627422.1-201ENST00000434104 580 ntBASIC21.21■□□□□ 0.99
CHGAP10645 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC21.21■□□□□ 0.99
CHGAP10645 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 RPSAP15-201ENST00000448168 861 ntBASIC21.21■□□□□ 0.99
CHGAP10645 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC21.21■□□□□ 0.99
CHGAP10645 AC093752.3-201ENST00000567343 901 ntBASIC21.21■□□□□ 0.99
CHGAP10645 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC21.21■□□□□ 0.99
CHGAP10645 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHGAP10645 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGAP10645 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
CHGAP10645 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CHGAP10645 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CHGAP10645 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
CHGAP10645 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC21.2■□□□□ 0.98
CHGAP10645 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC21.2■□□□□ 0.98
CHGAP10645 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 AL627389.1-201ENST00000413508 1182 ntBASIC21.2■□□□□ 0.98
CHGAP10645 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC21.2■□□□□ 0.98
CHGAP10645 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC21.2■□□□□ 0.98
CHGAP10645 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC21.2■□□□□ 0.98
CHGAP10645 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 NDUFS6P1-201ENST00000485187 316 ntBASIC21.2■□□□□ 0.98
CHGAP10645 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC21.2■□□□□ 0.98
CHGAP10645 DNM1P30-201ENST00000563586 452 ntBASIC21.2■□□□□ 0.98
CHGAP10645 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CHGAP10645 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC21.2■□□□□ 0.98
CHGAP10645 MIR4649-201ENST00000582839 64 ntBASIC21.2■□□□□ 0.98
CHGAP10645 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC21.2■□□□□ 0.98
CHGAP10645 MIR3188-201ENST00000583494 85 ntBASIC21.2■□□□□ 0.98
CHGAP10645 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CHGAP10645 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CHGAP10645 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC21.2■□□□□ 0.98
CHGAP10645 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGAP10645 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC21.19■□□□□ 0.98
CHGAP10645 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 LINC00554-201ENST00000564841 3011 ntBASIC21.19■□□□□ 0.98
CHGAP10645 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC21.19■□□□□ 0.98
CHGAP10645 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 MIR557-201ENST00000385239 98 ntBASIC21.19■□□□□ 0.98
CHGAP10645 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHGAP10645 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms