Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AC011742.3-201ENST00000439053 820 ntBASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AC100827.2-201ENST00000563214 1194 ntBASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 DUX4L46-201ENST00000566845 751 ntBASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AC005324.6-201ENST00000587972 613 ntBASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AC009955.4-201ENST00000597192 544 ntBASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AL021578.1-201ENST00000613646 709 ntBASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AC004923.1-202ENST00000642106 209 ntBASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40ALP0C0E4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 RN7SKP230-201ENST00000365642 335 ntBASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 AC013355.1-201ENST00000562625 723 ntBASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 AL136295.7-201ENST00000619226 1200 ntBASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 LILRP1-201ENST00000444199 1370 ntBASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 AC011840.2-201ENST00000563063 1520 ntBASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 AC097376.2-205ENST00000610159 5334 ntBASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40ALP0C0E4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB40ALP0C0E4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms