Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CICP17-201ENST00000418553 2377 ntBASIC13.28□□□□□ -0.28
APOC1P02654 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOC1P02654 AC027601.5-201ENST00000624065 2482 ntBASIC13.28□□□□□ -0.28
APOC1P02654 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOC1P02654 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
APOC1P02654 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOC1P02654 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.27□□□□□ -0.28
APOC1P02654 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
APOC1P02654 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
APOC1P02654 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.27□□□□□ -0.28
APOC1P02654 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOC1P02654 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.27□□□□□ -0.28
APOC1P02654 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOC1P02654 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
APOC1P02654 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOC1P02654 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.27□□□□□ -0.28
APOC1P02654 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
APOC1P02654 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.27□□□□□ -0.29
APOC1P02654 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.27□□□□□ -0.29
APOC1P02654 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 AC134915.1-201ENST00000426461 574 ntBASIC13.27□□□□□ -0.29
APOC1P02654 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.27□□□□□ -0.29
APOC1P02654 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.27□□□□□ -0.29
APOC1P02654 AC055876.2-201ENST00000531834 546 ntBASIC13.27□□□□□ -0.29
APOC1P02654 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.27□□□□□ -0.29
APOC1P02654 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.27□□□□□ -0.29
APOC1P02654 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
APOC1P02654 AC009118.2-201ENST00000613275 655 ntBASIC13.27□□□□□ -0.29
APOC1P02654 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.27□□□□□ -0.29
APOC1P02654 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
APOC1P02654 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 AL158070.2-201ENST00000623713 1621 ntBASIC13.27□□□□□ -0.29
APOC1P02654 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
APOC1P02654 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 BEND3P1-201ENST00000421591 1944 ntBASIC13.27□□□□□ -0.29
APOC1P02654 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.27□□□□□ -0.29
APOC1P02654 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
APOC1P02654 STRCP1-201ENST00000509801 5328 ntBASIC13.26□□□□□ -0.29
APOC1P02654 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC1P02654 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
APOC1P02654 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 SPDYE19P-201ENST00000338590 713 ntBASIC13.26□□□□□ -0.29
APOC1P02654 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC1P02654 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.26□□□□□ -0.29
APOC1P02654 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.26□□□□□ -0.29
APOC1P02654 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.26□□□□□ -0.29
APOC1P02654 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.26□□□□□ -0.29
APOC1P02654 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.26□□□□□ -0.29
APOC1P02654 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.26□□□□□ -0.29
APOC1P02654 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.26□□□□□ -0.29
APOC1P02654 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.26□□□□□ -0.29
APOC1P02654 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.26□□□□□ -0.29
APOC1P02654 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
APOC1P02654 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOC1P02654 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
APOC1P02654 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms