Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
PAX4O43316 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 AC011495.1-201ENST00000498085 584 ntBASIC10.75□□□□□ -0.69
PAX4O43316 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.75□□□□□ -0.69
PAX4O43316 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 IFT20-206ENST00000578122 834 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 IFT20-208ENST00000578985 831 ntTSL 3 BASIC10.75□□□□□ -0.69
PAX4O43316 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 AL033527.5-201ENST00000641382 801 ntBASIC10.75□□□□□ -0.69
PAX4O43316 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 AC106881.1-201ENST00000605849 3329 ntBASIC10.75□□□□□ -0.69
PAX4O43316 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 AC139749.1-202ENST00000617529 3139 ntBASIC10.75□□□□□ -0.69
PAX4O43316 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
PAX4O43316 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
PAX4O43316 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
PAX4O43316 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
PAX4O43316 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
PAX4O43316 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
PAX4O43316 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
PAX4O43316 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
PAX4O43316 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
PAX4O43316 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
PAX4O43316 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
PAX4O43316 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.74□□□□□ -0.69
PAX4O43316 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.74□□□□□ -0.69
PAX4O43316 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 AL158070.2-201ENST00000623713 1621 ntBASIC10.74□□□□□ -0.69
PAX4O43316 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 AC098614.1-201ENST00000368528 745 ntBASIC10.74□□□□□ -0.69
PAX4O43316 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
PAX4O43316 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 DGCR5-201ENST00000399539 862 ntBASIC10.74□□□□□ -0.69
PAX4O43316 AC104457.1-201ENST00000401024 814 ntBASIC10.74□□□□□ -0.69
PAX4O43316 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC10.74□□□□□ -0.69
PAX4O43316 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
PAX4O43316 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.74□□□□□ -0.69
PAX4O43316 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.74□□□□□ -0.69
PAX4O43316 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC10.74□□□□□ -0.69
PAX4O43316 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms