Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LINC00473A8K010 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00473A8K010 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 AL136172.1-201ENST00000598590 1394 ntBASIC12.15□□□□□ -0.46
LINC00473A8K010 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00473A8K010 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00473A8K010 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
LINC00473A8K010 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LINC00473A8K010 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
LINC00473A8K010 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
LINC00473A8K010 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LINC00473A8K010 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
LINC00473A8K010 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.15□□□□□ -0.47
LINC00473A8K010 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC00473A8K010 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LINC00473A8K010 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 MYADML-201ENST00000474610 2147 ntBASIC12.14□□□□□ -0.47
LINC00473A8K010 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LINC00473A8K010 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00473A8K010 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC00473A8K010 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 ACTBP8-201ENST00000403258 1108 ntBASIC12.14□□□□□ -0.47
LINC00473A8K010 TLE1P1-201ENST00000422965 589 ntBASIC12.14□□□□□ -0.47
LINC00473A8K010 PMS2P2-201ENST00000425039 1128 ntBASIC12.14□□□□□ -0.47
LINC00473A8K010 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.14□□□□□ -0.47
LINC00473A8K010 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.14□□□□□ -0.47
LINC00473A8K010 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
LINC00473A8K010 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 CHCHD2P3-201ENST00000603038 451 ntBASIC12.14□□□□□ -0.47
LINC00473A8K010 TMEM261P1-201ENST00000604899 340 ntBASIC12.14□□□□□ -0.47
LINC00473A8K010 AC006538.3-201ENST00000612495 578 ntBASIC12.14□□□□□ -0.47
LINC00473A8K010 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC00473A8K010 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00473A8K010 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00473A8K010 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00473A8K010 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00473A8K010 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00473A8K010 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC00473A8K010 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00473A8K010 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00473A8K010 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.13□□□□□ -0.47
LINC00473A8K010 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00473A8K010 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC00473A8K010 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00473A8K010 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00473A8K010 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00473A8K010 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00473A8K010 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms