Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AL353726.2-201ENST00000623259 884 ntBASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC144AA2RUR9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 AC006480.2-201ENST00000609770 1337 ntBASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC144AA2RUR9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 RPL17P11-201ENST00000417593 544 ntBASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 NDUFS6P1-201ENST00000485187 316 ntBASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC144AA2RUR9 CROCCP1-201ENST00000426910 5675 ntBASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 MIR557-201ENST00000385239 98 ntBASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 AC069218.1-201ENST00000435269 762 ntBASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 AC008723.1-201ENST00000506922 207 ntBASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 MBP-227ENST00000526111 581 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 LINC01783-202ENST00000614408 828 ntBASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 MIR6769A-201ENST00000617340 73 ntBASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 BX284668.2-205ENST00000619677 828 ntBASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC144AA2RUR9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 KRT8P31-201ENST00000504812 1408 ntBASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 AC026316.1-201ENST00000398900 414 ntBASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 NAT9-220ENST00000582870 896 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 YRDCP1-201ENST00000621419 643 ntBASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC144AA2RUR9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms