Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 CAP2P1-201ENST00000557743 1390 ntBASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC187A0A096LP49 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AP000356.3-201ENST00000382243 753 ntBASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AL645933.1-201ENST00000440087 609 ntBASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 RPL7P35-201ENST00000446943 740 ntBASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AC079112.1-201ENST00000454972 939 ntBASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 GCOM2-201ENST00000509133 1104 ntBASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 RBM8B-201ENST00000555532 525 ntBASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AC135983.4-201ENST00000564116 1262 ntBASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AC007718.1-201ENST00000621078 280 ntBASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC187A0A096LP49 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 AP002803.1-201ENST00000528836 498 ntBASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 MIR3677-201ENST00000578964 60 ntBASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC187A0A096LP49 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms