Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 AL157902.2-201ENST00000623435 1492 ntBASIC17.85■□□□□ 0.45
RTN4Q9NQC3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RTN4Q9NQC3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 AC026992.2-203ENST00000563004 2419 ntBASIC17.84■□□□□ 0.45
RTN4Q9NQC3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 C8orf17-202ENST00000625034 2775 ntBASIC17.84■□□□□ 0.45
RTN4Q9NQC3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 FAM197Y8-203ENST00000450145 560 ntBASIC17.84■□□□□ 0.45
RTN4Q9NQC3 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 AL031432.2-201ENST00000566714 459 ntBASIC17.84■□□□□ 0.45
RTN4Q9NQC3 AL928711.1-201ENST00000570165 459 ntBASIC17.84■□□□□ 0.45
RTN4Q9NQC3 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 AL645728.2-201ENST00000641974 660 ntBASIC17.84■□□□□ 0.45
RTN4Q9NQC3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
RTN4Q9NQC3 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 ASNS-203ENST00000394309 2289 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN4Q9NQC3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 HAUS4P1-201ENST00000406739 1145 ntBASIC17.83■□□□□ 0.44
RTN4Q9NQC3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 PRSS29P-201ENST00000440800 595 ntBASIC17.83■□□□□ 0.44
RTN4Q9NQC3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 AC117500.6-201ENST00000624871 588 ntBASIC17.83■□□□□ 0.44
RTN4Q9NQC3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RTN4Q9NQC3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms