Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NEUROD4Q9HD90 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 ACKR1-201ENST00000368121 1240 ntBASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 MYCLP2-201ENST00000449268 967 ntBASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 AC026434.2-201ENST00000506094 1078 ntBASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 AGGF1P1-201ENST00000509500 2073 ntBASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.13□□□□□ -0.15
NEUROD4Q9HD90 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AC007969.1-201ENST00000433675 447 ntBASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AP001063.1-201ENST00000568332 529 ntBASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AC140912.1-201ENST00000577171 1054 ntBASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AC005252.2-201ENST00000624630 1141 ntBASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NEUROD4Q9HD90 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms