Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 AC011477.6-201ENST00000604980 1927 ntBASIC15.79■□□□□ 0.12
CD248Q9HCU0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 AC022137.2-201ENST00000503482 481 ntBASIC15.79■□□□□ 0.12
CD248Q9HCU0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 MROH4P-201ENST00000431302 1578 ntBASIC15.79■□□□□ 0.12
CD248Q9HCU0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD248Q9HCU0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CD248Q9HCU0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AC134312.5-201ENST00000568031 1313 ntBASIC15.78■□□□□ 0.12
CD248Q9HCU0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 ACKR1-201ENST00000368121 1240 ntBASIC15.78■□□□□ 0.12
CD248Q9HCU0 MIR648-201ENST00000385046 94 ntBASIC15.78■□□□□ 0.12
CD248Q9HCU0 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AL355994.2-201ENST00000447882 704 ntBASIC15.78■□□□□ 0.12
CD248Q9HCU0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AC244669.2-201ENST00000612320 853 ntBASIC15.78■□□□□ 0.12
CD248Q9HCU0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 C18orf15-201ENST00000623680 2534 ntBASIC15.78■□□□□ 0.12
CD248Q9HCU0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 MYO15B-237ENST00000642007 4893 ntBASIC15.78■□□□□ 0.12
CD248Q9HCU0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD248Q9HCU0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.78■□□□□ 0.12
CD248Q9HCU0 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms