Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ARID3AQ99856 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.13■□□□□ 0.33
ARID3AQ99856 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 RPL37AP1-201ENST00000412502 279 ntBASIC17.13■□□□□ 0.33
ARID3AQ99856 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.13■□□□□ 0.33
ARID3AQ99856 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.13■□□□□ 0.33
ARID3AQ99856 RFPL4AP1-201ENST00000530883 850 ntBASIC17.13■□□□□ 0.33
ARID3AQ99856 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.13■□□□□ 0.33
ARID3AQ99856 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 AL589739.1-201ENST00000607720 493 ntBASIC17.13■□□□□ 0.33
ARID3AQ99856 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ARID3AQ99856 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ARID3AQ99856 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ARID3AQ99856 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
ARID3AQ99856 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARID3AQ99856 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ARID3AQ99856 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ARID3AQ99856 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC17.12■□□□□ 0.33
ARID3AQ99856 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ARID3AQ99856 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ARID3AQ99856 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ARID3AQ99856 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.12■□□□□ 0.33
ARID3AQ99856 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ARID3AQ99856 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.12■□□□□ 0.33
ARID3AQ99856 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.12■□□□□ 0.33
ARID3AQ99856 SPDYE17-201ENST00000412399 783 ntBASIC17.12■□□□□ 0.33
ARID3AQ99856 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.12■□□□□ 0.33
ARID3AQ99856 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.12■□□□□ 0.33
ARID3AQ99856 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.12■□□□□ 0.33
ARID3AQ99856 FAM86GP-201ENST00000448322 971 ntBASIC17.12■□□□□ 0.33
ARID3AQ99856 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.12■□□□□ 0.33
ARID3AQ99856 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.12■□□□□ 0.33
ARID3AQ99856 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 DUX4L27-201ENST00000554796 1261 ntBASIC17.12■□□□□ 0.33
ARID3AQ99856 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ARID3AQ99856 AL138828.2-201ENST00000615812 383 ntBASIC17.12■□□□□ 0.33
ARID3AQ99856 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.12■□□□□ 0.33
ARID3AQ99856 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ARID3AQ99856 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ARID3AQ99856 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.12■□□□□ 0.33
ARID3AQ99856 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ARID3AQ99856 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARID3AQ99856 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.11■□□□□ 0.33
ARID3AQ99856 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC17.11■□□□□ 0.33
ARID3AQ99856 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.11■□□□□ 0.33
ARID3AQ99856 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ARID3AQ99856 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ARID3AQ99856 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.11■□□□□ 0.33
ARID3AQ99856 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
ARID3AQ99856 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ARID3AQ99856 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ARID3AQ99856 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.11■□□□□ 0.33
ARID3AQ99856 AC107890.1-201ENST00000422478 521 ntBASIC17.11■□□□□ 0.33
ARID3AQ99856 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.11■□□□□ 0.33
ARID3AQ99856 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.11■□□□□ 0.33
ARID3AQ99856 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ARID3AQ99856 AC244517.3-201ENST00000616254 1235 ntBASIC17.11■□□□□ 0.33
ARID3AQ99856 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.11■□□□□ 0.33
ARID3AQ99856 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ARID3AQ99856 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARID3AQ99856 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms