Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC131902.2-201ENST00000566892 2172 ntBASIC13.68□□□□□ -0.22
SNX18Q96RF0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC009477.1-201ENST00000452936 217 ntBASIC13.68□□□□□ -0.22
SNX18Q96RF0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 MEIS3P1-201ENST00000495167 958 ntBASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC004233.3-201ENST00000607794 1269 ntBASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC009118.2-201ENST00000613275 655 ntBASIC13.68□□□□□ -0.22
SNX18Q96RF0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.68□□□□□ -0.22
SNX18Q96RF0 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SNX18Q96RF0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SNX18Q96RF0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 AL645937.2-201ENST00000396808 931 ntBASIC13.67□□□□□ -0.22
SNX18Q96RF0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 MRPS18AP1-201ENST00000414458 589 ntBASIC13.67□□□□□ -0.22
SNX18Q96RF0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 TSSK5P-201ENST00000423978 907 ntBASIC13.67□□□□□ -0.22
SNX18Q96RF0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.67□□□□□ -0.22
SNX18Q96RF0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms