Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 AC104073.2-201ENST00000453737 312 ntBASIC13.3□□□□□ -0.28
RNF138Q8WVD3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 AHCYP4-201ENST00000419201 1315 ntBASIC13.3□□□□□ -0.28
RNF138Q8WVD3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 AC020907.1-201ENST00000616460 1350 ntBASIC13.3□□□□□ -0.28
RNF138Q8WVD3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RNF138Q8WVD3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 AC011498.7-201ENST00000624986 2027 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 GPAA1P2-201ENST00000417923 928 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 AC016700.1-201ENST00000429424 312 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 OR2R1P-201ENST00000441404 914 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 BX284668.4-201ENST00000453917 508 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 KRT8P13-201ENST00000463294 1010 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 AC106794.1-201ENST00000506935 792 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 AC008805.1-201ENST00000590892 364 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 AL645939.5-201ENST00000606834 243 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 AL451050.2-201ENST00000606967 682 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 LINC02228-204ENST00000642115 2962 ntBASIC13.29□□□□□ -0.28
RNF138Q8WVD3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RNF138Q8WVD3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF138Q8WVD3 AC005740.2-201ENST00000511085 419 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms