Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 TUBB1P2-201ENST00000422712 1306 ntBASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 CLUHP2-201ENST00000426660 1303 ntBASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 TUBB1P1-201ENST00000503144 1300 ntBASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 CICP24-201ENST00000605464 2705 ntBASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 AL355994.2-201ENST00000447882 704 ntBASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 DUX4L45-201ENST00000566406 1057 ntBASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 OR10B1P-201ENST00000601666 907 ntBASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.47□□□□□ -0.25
FNDC9Q8TBE3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 AC106881.1-201ENST00000605849 3329 ntBASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 RN7SL560P-201ENST00000577943 264 ntBASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 MIR4741-201ENST00000579822 90 ntBASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 AC138466.3-201ENST00000619983 221 ntBASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 SNX18-202ENST00000343017 3140 ntBASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
FNDC9Q8TBE3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
FNDC9Q8TBE3 LINC01101-201ENST00000622953 1884 ntBASIC13.46□□□□□ -0.26
FNDC9Q8TBE3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
FNDC9Q8TBE3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.46□□□□□ -0.26
FNDC9Q8TBE3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
FNDC9Q8TBE3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms