Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 HIST3H2BA-201ENST00000436555 524 ntBASIC12.96□□□□□ -0.33
BEST4Q8NFU0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 TIMM8BP1-201ENST00000452384 211 ntBASIC12.96□□□□□ -0.33
BEST4Q8NFU0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 TPT1P11-201ENST00000458482 498 ntBASIC12.96□□□□□ -0.33
BEST4Q8NFU0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 AC105021.1-202ENST00000570572 669 ntBASIC12.96□□□□□ -0.33
BEST4Q8NFU0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 AC084121.4-201ENST00000641598 221 ntBASIC12.96□□□□□ -0.33
BEST4Q8NFU0 AF228730.8-201ENST00000642140 221 ntBASIC12.96□□□□□ -0.33
BEST4Q8NFU0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 AC015818.8-201ENST00000587907 1519 ntBASIC12.96□□□□□ -0.33
BEST4Q8NFU0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BEST4Q8NFU0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
BEST4Q8NFU0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 KRT18P3-201ENST00000451602 1288 ntBASIC12.95□□□□□ -0.34
BEST4Q8NFU0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 AC055717.3-201ENST00000622967 595 ntBASIC12.95□□□□□ -0.34
BEST4Q8NFU0 AL645728.2-202ENST00000641679 227 ntBASIC12.95□□□□□ -0.34
BEST4Q8NFU0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.95□□□□□ -0.34
BEST4Q8NFU0 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
BEST4Q8NFU0 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms