Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 AC006453.1-201ENST00000636037 1257 ntBASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 TMBIM7P-203ENST00000641617 1718 ntBASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 AC092850.2-201ENST00000623821 2697 ntBASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ZNF248Q8NDW4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 FGFR3P1-201ENST00000449999 601 ntBASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 AC104073.2-201ENST00000453737 312 ntBASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 RN7SL8P-201ENST00000461771 266 ntBASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 RN7SL181P-201ENST00000462921 277 ntBASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 AP003171.2-201ENST00000528208 925 ntBASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF248Q8NDW4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 CEP164P1-201ENST00000455142 418 ntBASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 RTN3P1-201ENST00000536295 711 ntBASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AC090164.2-201ENST00000611487 516 ntBASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 AC068587.8-201ENST00000641239 219 ntBASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 NAP1L6-202ENST00000641404 1222 ntBASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms