Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SIX5Q8N196 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.3■□□□□ 0.04
SIX5Q8N196 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.3■□□□□ 0.04
SIX5Q8N196 AC012441.2-201ENST00000444843 739 ntBASIC15.3■□□□□ 0.04
SIX5Q8N196 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 RN7SL258P-201ENST00000478664 300 ntBASIC15.3■□□□□ 0.04
SIX5Q8N196 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.3■□□□□ 0.04
SIX5Q8N196 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.3■□□□□ 0.04
SIX5Q8N196 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.3■□□□□ 0.04
SIX5Q8N196 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 AC138894.2-201ENST00000602838 371 ntBASIC15.3■□□□□ 0.04
SIX5Q8N196 AL008718.2-201ENST00000609206 1313 ntBASIC15.3■□□□□ 0.04
SIX5Q8N196 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 INE2-201ENST00000630399 1874 ntBASIC15.3■□□□□ 0.04
SIX5Q8N196 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SIX5Q8N196 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SIX5Q8N196 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SIX5Q8N196 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SIX5Q8N196 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 AC099063.4-201ENST00000641099 1602 ntBASIC15.29■□□□□ 0.04
SIX5Q8N196 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.29■□□□□ 0.04
SIX5Q8N196 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SIX5Q8N196 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.29■□□□□ 0.04
SIX5Q8N196 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SIX5Q8N196 AL592076.1-201ENST00000424448 303 ntBASIC15.29■□□□□ 0.04
SIX5Q8N196 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 KLF2P1-201ENST00000447438 1042 ntBASIC15.29■□□□□ 0.04
SIX5Q8N196 AL157792.1-201ENST00000488281 530 ntBASIC15.29■□□□□ 0.04
SIX5Q8N196 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 SCARNA21-201ENST00000517026 139 ntBASIC15.29■□□□□ 0.04
SIX5Q8N196 AC026803.1-201ENST00000569130 274 ntBASIC15.29■□□□□ 0.04
SIX5Q8N196 AC005357.2-202ENST00000590507 1060 ntBASIC15.29■□□□□ 0.04
SIX5Q8N196 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 AL109837.1-201ENST00000603272 613 ntBASIC15.29■□□□□ 0.04
SIX5Q8N196 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SIX5Q8N196 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SIX5Q8N196 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SIX5Q8N196 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.29■□□□□ 0.04
SIX5Q8N196 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 KRT8P21-201ENST00000430398 1491 ntBASIC15.28■□□□□ 0.04
SIX5Q8N196 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.28■□□□□ 0.04
SIX5Q8N196 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
SIX5Q8N196 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.28■□□□□ 0.04
SIX5Q8N196 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIX5Q8N196 AL512430.1-201ENST00000392575 860 ntBASIC15.28■□□□□ 0.04
SIX5Q8N196 AC012362.1-201ENST00000434906 739 ntBASIC15.28■□□□□ 0.04
SIX5Q8N196 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.28■□□□□ 0.04
SIX5Q8N196 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.28■□□□□ 0.04
SIX5Q8N196 PIN4P1-201ENST00000451079 396 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms