Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 AC007969.1-201ENST00000433675 447 ntBASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 LINC02560-201ENST00000596379 459 ntBASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 WFDC1-204ENST00000613603 549 ntBASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 AC087499.6-201ENST00000411576 835 ntBASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 FO681548.1-201ENST00000455617 1132 ntBASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 RN7SL204P-201ENST00000582831 262 ntBASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 CU634019.7-201ENST00000624153 1185 ntBASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 FP236241.2-201ENST00000624906 1185 ntBASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 AC104581.4-201ENST00000623126 3052 ntBASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 AL136172.1-201ENST00000598590 1394 ntBASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC83Q8IWF9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 MSTO2P-201ENST00000314835 1709 ntBASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 KRT8P35-201ENST00000483942 1338 ntBASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC83Q8IWF9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms