Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 AC010336.2-201ENST00000564226 506 ntBASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NUDCD3Q8IVD9 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 HLA-V-204ENST00000476601 1289 ntBASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NUDCD3Q8IVD9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 KRT8P14-201ENST00000414254 1442 ntBASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 AL158070.2-201ENST00000623713 1621 ntBASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 YBX1P5-201ENST00000509441 847 ntBASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 TEX28P1-201ENST00000613479 1221 ntBASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 TEX28P2-201ENST00000617764 1221 ntBASIC14.86□□□□□ -0.03
NUDCD3Q8IVD9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms