Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC026954.1-201ENST00000429771 1293 ntBASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC106820.3-201ENST00000561653 397 ntBASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 OR10B1P-201ENST00000601666 907 ntBASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 AC020910.5-201ENST00000623668 1865 ntBASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD3Q7Z3D4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 MIR1202-201ENST00000408529 83 ntBASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 FAM8A4P-201ENST00000435433 1213 ntBASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 RPS2P32-201ENST00000439199 892 ntBASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AC119751.2-201ENST00000504529 210 ntBASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AP003171.2-201ENST00000528208 925 ntBASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AC138696.2-201ENST00000607376 223 ntBASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LYSMD3Q7Z3D4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 CD8B2-202ENST00000417670 633 ntBASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 TLE1P1-201ENST00000422965 589 ntBASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.99□□□□□ -0.01
LYSMD3Q7Z3D4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms