Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC018442.1-201ENST00000421439 2061 ntBASIC13.87□□□□□ -0.19
TUBA1AQ71U36 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 TARDBPP1-201ENST00000442013 1203 ntBASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC104794.3-201ENST00000566840 1248 ntBASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 LINC01115-203ENST00000606068 577 ntBASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AC004461.2-201ENST00000629517 803 ntBASIC13.87□□□□□ -0.19
TUBA1AQ71U36 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AL607033.1-201ENST00000623900 1599 ntBASIC13.87□□□□□ -0.19
TUBA1AQ71U36 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TUBA1AQ71U36 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 GNAQP1-201ENST00000444815 1067 ntBASIC13.86□□□□□ -0.19
TUBA1AQ71U36 AL589987.1-201ENST00000453380 819 ntBASIC13.86□□□□□ -0.19
TUBA1AQ71U36 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 SDHAP3-202ENST00000515467 728 ntBASIC13.86□□□□□ -0.19
TUBA1AQ71U36 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 RN7SL204P-201ENST00000582831 262 ntBASIC13.86□□□□□ -0.19
TUBA1AQ71U36 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 AC004790.1-201ENST00000612686 536 ntBASIC13.86□□□□□ -0.19
TUBA1AQ71U36 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 AC023090.2-201ENST00000625182 2110 ntBASIC13.86□□□□□ -0.19
TUBA1AQ71U36 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.86□□□□□ -0.19
TUBA1AQ71U36 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms