Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 ZNF890P-202ENST00000530367 1156 ntBASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 AL109936.8-201ENST00000641772 604 ntBASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM53Q6P2H8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 Z97205.2-201ENST00000564697 1639 ntBASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM53Q6P2H8 MIR770-201ENST00000390219 98 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms