Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC8.85□□□□□ -0.99
HSPG2P98160 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
HSPG2P98160 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
HSPG2P98160 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC8.85□□□□□ -0.99
HSPG2P98160 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
HSPG2P98160 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC8.84□□□□□ -0.99
HSPG2P98160 GALP-202ENST00000440823 889 ntTSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC8.84□□□□□ -0.99
HSPG2P98160 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 SARS-202ENST00000369923 1882 ntTSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 KRT18P33-201ENST00000398525 1043 ntBASIC8.84□□□□□ -0.99
HSPG2P98160 AL450346.2-201ENST00000495602 1024 ntBASIC8.84□□□□□ -0.99
HSPG2P98160 AL359219.1-201ENST00000556311 934 ntBASIC8.84□□□□□ -0.99
HSPG2P98160 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC8.84□□□□□ -0.99
HSPG2P98160 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 AL603832.2-201ENST00000566195 2125 ntBASIC8.84□□□□□ -0.99
HSPG2P98160 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 WDR54-202ENST00000409791 854 ntTSL 3 BASIC8.84□□□□□ -0.99
HSPG2P98160 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC8.84□□□□□ -0.99
HSPG2P98160 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 KF455155.1-201ENST00000604493 303 ntBASIC8.84□□□□□ -0.99
HSPG2P98160 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
HSPG2P98160 AL590556.2-202ENST00000636906 844 ntBASIC8.84□□□□□ -0.99
HSPG2P98160 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC8.84□□□□□ -0.99
HSPG2P98160 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HSPG2P98160 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
HSPG2P98160 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC8.84□□□□□ -1
HSPG2P98160 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC8.84□□□□□ -1
HSPG2P98160 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
HSPG2P98160 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC8.83□□□□□ -1
HSPG2P98160 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
HSPG2P98160 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC8.83□□□□□ -1
HSPG2P98160 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
HSPG2P98160 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC8.83□□□□□ -1
HSPG2P98160 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
HSPG2P98160 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HSPG2P98160 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC8.83□□□□□ -1
HSPG2P98160 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC8.83□□□□□ -1
HSPG2P98160 RPL3P2-204ENST00000413027 1203 ntBASIC8.83□□□□□ -1
HSPG2P98160 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC8.83□□□□□ -1
HSPG2P98160 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC8.83□□□□□ -1
HSPG2P98160 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
HSPG2P98160 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC8.83□□□□□ -1
HSPG2P98160 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC8.83□□□□□ -1
HSPG2P98160 AL133467.4-201ENST00000602953 725 ntBASIC8.83□□□□□ -1
HSPG2P98160 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms