Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB11AP62491 SERBP1P3-201ENST00000459980 809 ntBASIC12.22□□□□□ -0.45
RAB11AP62491 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB11AP62491 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB11AP62491 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB11AP62491 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB11AP62491 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB11AP62491 RN7SL828P-201ENST00000607615 303 ntBASIC12.22□□□□□ -0.45
RAB11AP62491 C20orf181-201ENST00000623918 480 ntBASIC12.22□□□□□ -0.45
RAB11AP62491 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB11AP62491 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB11AP62491 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB11AP62491 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB11AP62491 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB11AP62491 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB11AP62491 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB11AP62491 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RAB11AP62491 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
RAB11AP62491 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB11AP62491 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB11AP62491 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RAB11AP62491 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
RAB11AP62491 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
RAB11AP62491 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RAB11AP62491 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RAB11AP62491 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.21□□□□□ -0.45
RAB11AP62491 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RAB11AP62491 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 AC104457.1-201ENST00000401024 814 ntBASIC12.21□□□□□ -0.45
RAB11AP62491 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
RAB11AP62491 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
RAB11AP62491 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.21□□□□□ -0.45
RAB11AP62491 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.21□□□□□ -0.45
RAB11AP62491 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.21□□□□□ -0.45
RAB11AP62491 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
RAB11AP62491 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
RAB11AP62491 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RAB11AP62491 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.21□□□□□ -0.46
RAB11AP62491 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB11AP62491 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.46
RAB11AP62491 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
RAB11AP62491 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RAB11AP62491 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.21□□□□□ -0.46
RAB11AP62491 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RAB11AP62491 AC015802.1-201ENST00000588104 1449 ntBASIC12.2□□□□□ -0.46
RAB11AP62491 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.2□□□□□ -0.46
RAB11AP62491 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
RAB11AP62491 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.2□□□□□ -0.46
RAB11AP62491 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RAB11AP62491 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RAB11AP62491 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms