Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBE2NP61088 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 ACE3P-201ENST00000423435 1973 ntBASIC13.16□□□□□ -0.3
UBE2NP61088 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UBE2NP61088 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UBE2NP61088 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.15□□□□□ -0.3
UBE2NP61088 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 ANKRD19P-201ENST00000338192 862 ntBASIC13.15□□□□□ -0.3
UBE2NP61088 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
UBE2NP61088 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 POM121L8P-201ENST00000417732 1281 ntBASIC13.15□□□□□ -0.3
UBE2NP61088 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 AC007969.1-201ENST00000433675 447 ntBASIC13.15□□□□□ -0.3
UBE2NP61088 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 POM121L9P-203ENST00000441984 1285 ntBASIC13.15□□□□□ -0.3
UBE2NP61088 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.15□□□□□ -0.3
UBE2NP61088 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.15□□□□□ -0.3
UBE2NP61088 AC138466.3-201ENST00000619983 221 ntBASIC13.15□□□□□ -0.3
UBE2NP61088 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.15□□□□□ -0.3
UBE2NP61088 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UBE2NP61088 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
UBE2NP61088 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
UBE2NP61088 ST20-AS1-201ENST00000560255 4223 ntBASIC13.15□□□□□ -0.3
UBE2NP61088 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.15□□□□□ -0.3
UBE2NP61088 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.15□□□□□ -0.3
UBE2NP61088 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBE2NP61088 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
UBE2NP61088 AC006058.4-201ENST00000624016 1670 ntBASIC13.15□□□□□ -0.31
UBE2NP61088 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
UBE2NP61088 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.15□□□□□ -0.31
UBE2NP61088 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
UBE2NP61088 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2NP61088 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2NP61088 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
UBE2NP61088 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.14□□□□□ -0.31
UBE2NP61088 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2NP61088 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2NP61088 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
UBE2NP61088 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.14□□□□□ -0.31
UBE2NP61088 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.14□□□□□ -0.31
UBE2NP61088 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.14□□□□□ -0.31
UBE2NP61088 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.14□□□□□ -0.31
UBE2NP61088 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2NP61088 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
UBE2NP61088 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UBE2NP61088 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms