Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RHBDL3P58872 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.38■□□□□ 0.37
RHBDL3P58872 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RHBDL3P58872 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.37■□□□□ 0.37
RHBDL3P58872 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 AL627231.1-201ENST00000394467 1125 ntBASIC17.37■□□□□ 0.37
RHBDL3P58872 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.37■□□□□ 0.37
RHBDL3P58872 RPL8P2-201ENST00000430538 502 ntBASIC17.37■□□□□ 0.37
RHBDL3P58872 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.37■□□□□ 0.37
RHBDL3P58872 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 MIR3147-201ENST00000577811 66 ntBASIC17.37■□□□□ 0.37
RHBDL3P58872 MIR5572-201ENST00000583188 137 ntBASIC17.37■□□□□ 0.37
RHBDL3P58872 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RHBDL3P58872 AC073352.2-201ENST00000609385 439 ntBASIC17.37■□□□□ 0.37
RHBDL3P58872 LINC01783-202ENST00000614408 828 ntBASIC17.37■□□□□ 0.37
RHBDL3P58872 BX284668.2-205ENST00000619677 828 ntBASIC17.37■□□□□ 0.37
RHBDL3P58872 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.37■□□□□ 0.37
RHBDL3P58872 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RHBDL3P58872 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
RHBDL3P58872 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.37■□□□□ 0.37
RHBDL3P58872 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RHBDL3P58872 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.37■□□□□ 0.37
RHBDL3P58872 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RHBDL3P58872 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.36■□□□□ 0.37
RHBDL3P58872 AC008723.1-201ENST00000506922 207 ntBASIC17.36■□□□□ 0.37
RHBDL3P58872 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 AC027237.1-201ENST00000560942 655 ntBASIC17.36■□□□□ 0.37
RHBDL3P58872 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.36■□□□□ 0.37
RHBDL3P58872 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
RHBDL3P58872 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.36■□□□□ 0.37
RHBDL3P58872 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.36■□□□□ 0.37
RHBDL3P58872 AC138894.2-201ENST00000602838 371 ntBASIC17.36■□□□□ 0.37
RHBDL3P58872 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 AC051619.9-201ENST00000623237 597 ntBASIC17.36■□□□□ 0.37
RHBDL3P58872 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 AL354702.1-201ENST00000442006 1960 ntBASIC17.36■□□□□ 0.37
RHBDL3P58872 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.36■□□□□ 0.37
RHBDL3P58872 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RHBDL3P58872 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RHBDL3P58872 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms