Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.46□□□□□ -0.25
SUMO3P55854 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SUMO3P55854 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SUMO3P55854 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SUMO3P55854 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
SUMO3P55854 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
SUMO3P55854 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SUMO3P55854 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.46□□□□□ -0.25
SUMO3P55854 KRT223P-202ENST00000449164 1292 ntBASIC13.46□□□□□ -0.25
SUMO3P55854 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.46□□□□□ -0.25
SUMO3P55854 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.46□□□□□ -0.25
SUMO3P55854 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.46□□□□□ -0.25
SUMO3P55854 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.46□□□□□ -0.25
SUMO3P55854 AL358472.3-201ENST00000608147 415 ntBASIC13.46□□□□□ -0.25
SUMO3P55854 MIR6775-201ENST00000617557 69 ntBASIC13.46□□□□□ -0.25
SUMO3P55854 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
SUMO3P55854 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.46□□□□□ -0.25
SUMO3P55854 KRT8P4-201ENST00000509735 1454 ntBASIC13.46□□□□□ -0.25
SUMO3P55854 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
SUMO3P55854 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SUMO3P55854 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SUMO3P55854 LINC02228-204ENST00000642115 2962 ntBASIC13.46□□□□□ -0.26
SUMO3P55854 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.46□□□□□ -0.26
SUMO3P55854 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SUMO3P55854 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.46□□□□□ -0.26
SUMO3P55854 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SUMO3P55854 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SUMO3P55854 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.46□□□□□ -0.26
SUMO3P55854 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SUMO3P55854 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SUMO3P55854 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SUMO3P55854 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.46□□□□□ -0.26
SUMO3P55854 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.45□□□□□ -0.26
SUMO3P55854 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.45□□□□□ -0.26
SUMO3P55854 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 MYADML-201ENST00000474610 2147 ntBASIC13.45□□□□□ -0.26
SUMO3P55854 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SUMO3P55854 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.45□□□□□ -0.26
SUMO3P55854 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.45□□□□□ -0.26
SUMO3P55854 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.45□□□□□ -0.26
SUMO3P55854 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 HLA-V-201ENST00000429037 534 ntBASIC13.45□□□□□ -0.26
SUMO3P55854 CSF2RBP1-201ENST00000447905 391 ntBASIC13.45□□□□□ -0.26
SUMO3P55854 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.45□□□□□ -0.26
SUMO3P55854 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.45□□□□□ -0.26
SUMO3P55854 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.45□□□□□ -0.26
SUMO3P55854 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.45□□□□□ -0.26
SUMO3P55854 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.45□□□□□ -0.26
SUMO3P55854 MIR4683-201ENST00000579659 81 ntBASIC13.45□□□□□ -0.26
SUMO3P55854 AL136301.1-201ENST00000615830 422 ntBASIC13.45□□□□□ -0.26
SUMO3P55854 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.45□□□□□ -0.26
SUMO3P55854 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SUMO3P55854 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 AC015688.4-201ENST00000580780 1647 ntBASIC13.45□□□□□ -0.26
SUMO3P55854 LINC00552-201ENST00000625151 2579 ntBASIC13.45□□□□□ -0.26
SUMO3P55854 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SUMO3P55854 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SUMO3P55854 AC009093.10-201ENST00000641956 1442 ntBASIC13.45□□□□□ -0.26
SUMO3P55854 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.45□□□□□ -0.26
SUMO3P55854 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.45□□□□□ -0.26
SUMO3P55854 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms