Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCL12P48061 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCL12P48061 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CXCL12P48061 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC14.63□□□□□ -0.07
CXCL12P48061 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.63□□□□□ -0.07
CXCL12P48061 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCL12P48061 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CXCL12P48061 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCL12P48061 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CXCL12P48061 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCL12P48061 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCL12P48061 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CXCL12P48061 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.63□□□□□ -0.07
CXCL12P48061 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CXCL12P48061 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CXCL12P48061 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
CXCL12P48061 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCL12P48061 MRPL37P1-201ENST00000592451 1337 ntBASIC14.63□□□□□ -0.07
CXCL12P48061 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCL12P48061 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CXCL12P48061 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CXCL12P48061 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.62□□□□□ -0.07
CXCL12P48061 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.62□□□□□ -0.07
CXCL12P48061 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.62□□□□□ -0.07
CXCL12P48061 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.62□□□□□ -0.07
CXCL12P48061 ERP29P1-201ENST00000442902 706 ntBASIC14.62□□□□□ -0.07
CXCL12P48061 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.62□□□□□ -0.07
CXCL12P48061 AC026410.1-201ENST00000507366 1101 ntBASIC14.62□□□□□ -0.07
CXCL12P48061 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.62□□□□□ -0.07
CXCL12P48061 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.62□□□□□ -0.07
CXCL12P48061 AC244250.3-201ENST00000620749 366 ntBASIC14.62□□□□□ -0.07
CXCL12P48061 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CXCL12P48061 AL451007.2-201ENST00000632004 563 ntBASIC14.62□□□□□ -0.07
CXCL12P48061 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.62□□□□□ -0.07
CXCL12P48061 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.62□□□□□ -0.07
CXCL12P48061 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CXCL12P48061 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CXCL12P48061 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CXCL12P48061 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL12P48061 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.61□□□□□ -0.07
CXCL12P48061 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.61□□□□□ -0.07
CXCL12P48061 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CXCL12P48061 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.61□□□□□ -0.07
CXCL12P48061 RN7SKP109-201ENST00000410592 316 ntBASIC14.61□□□□□ -0.07
CXCL12P48061 FAU-202ENST00000434372 533 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL12P48061 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL12P48061 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 RPL18AP8-201ENST00000486071 528 ntBASIC14.61□□□□□ -0.07
CXCL12P48061 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.61□□□□□ -0.07
CXCL12P48061 AC124068.2-201ENST00000569473 1109 ntBASIC14.61□□□□□ -0.07
CXCL12P48061 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.61□□□□□ -0.07
CXCL12P48061 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CXCL12P48061 AP001527.2-201ENST00000614441 631 ntBASIC14.61□□□□□ -0.07
CXCL12P48061 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.61□□□□□ -0.07
CXCL12P48061 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL12P48061 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CXCL12P48061 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.61□□□□□ -0.07
CXCL12P48061 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.61□□□□□ -0.07
CXCL12P48061 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.61□□□□□ -0.07
CXCL12P48061 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CXCL12P48061 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 TEKT4P2-202ENST00000559466 1312 ntBASIC14.61□□□□□ -0.07
CXCL12P48061 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CXCL12P48061 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CXCL12P48061 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms