Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.82■□□□□ 0.28
PRPHP41219 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRPHP41219 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.82■□□□□ 0.28
PRPHP41219 AC004945.1-201ENST00000416738 983 ntBASIC16.82■□□□□ 0.28
PRPHP41219 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PRPHP41219 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PRPHP41219 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.82■□□□□ 0.28
PRPHP41219 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PRPHP41219 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PRPHP41219 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.82■□□□□ 0.28
PRPHP41219 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PRPHP41219 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.82■□□□□ 0.28
PRPHP41219 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PRPHP41219 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.81■□□□□ 0.28
PRPHP41219 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PRPHP41219 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PRPHP41219 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.81■□□□□ 0.28
PRPHP41219 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.81■□□□□ 0.28
PRPHP41219 AC005089.1-201ENST00000619486 2241 ntBASIC16.81■□□□□ 0.28
PRPHP41219 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.81■□□□□ 0.28
PRPHP41219 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.81■□□□□ 0.28
PRPHP41219 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.81■□□□□ 0.28
PRPHP41219 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.81■□□□□ 0.28
PRPHP41219 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.81■□□□□ 0.28
PRPHP41219 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.81■□□□□ 0.28
PRPHP41219 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.81■□□□□ 0.28
PRPHP41219 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.81■□□□□ 0.28
PRPHP41219 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.81■□□□□ 0.28
PRPHP41219 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.81■□□□□ 0.28
PRPHP41219 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PRPHP41219 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 AC138951.2-201ENST00000623455 1161 ntBASIC16.81■□□□□ 0.28
PRPHP41219 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 AC097359.2-201ENST00000604992 2389 ntBASIC16.81■□□□□ 0.28
PRPHP41219 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.81■□□□□ 0.28
PRPHP41219 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PRPHP41219 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PRPHP41219 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PRPHP41219 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.81■□□□□ 0.28
PRPHP41219 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.81■□□□□ 0.28
PRPHP41219 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRPHP41219 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRPHP41219 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.8■□□□□ 0.28
PRPHP41219 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PRPHP41219 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.8■□□□□ 0.28
PRPHP41219 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.8■□□□□ 0.28
PRPHP41219 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 BOLA2P3-201ENST00000404566 256 ntBASIC16.8■□□□□ 0.28
PRPHP41219 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRPHP41219 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRPHP41219 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms