Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.11■□□□□ 0.01
CCND1P24385 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCND1P24385 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CCND1P24385 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCND1P24385 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCND1P24385 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCND1P24385 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
CCND1P24385 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.11■□□□□ 0.01
CCND1P24385 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCND1P24385 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.1■□□□□ 0.01
CCND1P24385 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.1■□□□□ 0.01
CCND1P24385 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.1■□□□□ 0.01
CCND1P24385 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CCND1P24385 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 AC083964.2-201ENST00000623988 2396 ntBASIC15.1■□□□□ 0.01
CCND1P24385 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 MRPS18AP1-201ENST00000414458 589 ntBASIC15.1■□□□□ 0.01
CCND1P24385 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.1■□□□□ 0.01
CCND1P24385 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.1■□□□□ 0.01
CCND1P24385 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.1■□□□□ 0.01
CCND1P24385 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.1■□□□□ 0.01
CCND1P24385 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 AC000095.1-201ENST00000603208 874 ntBASIC15.1■□□□□ 0.01
CCND1P24385 AL645728.2-202ENST00000641679 227 ntBASIC15.1■□□□□ 0.01
CCND1P24385 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CCND1P24385 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.1■□□□□ 0.01
CCND1P24385 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.1■□□□□ 0.01
CCND1P24385 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.1■□□□□ 0.01
CCND1P24385 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.1■□□□□ 0.01
CCND1P24385 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCND1P24385 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCND1P24385 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCND1P24385 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCND1P24385 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CCND1P24385 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCND1P24385 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.09■□□□□ 0.01
CCND1P24385 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.09■□□□□ 0.01
CCND1P24385 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.09■□□□□ 0.01
CCND1P24385 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.09■□□□□ 0.01
CCND1P24385 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.09■□□□□ 0.01
CCND1P24385 AC011467.4-201ENST00000594891 528 ntBASIC15.09■□□□□ 0.01
CCND1P24385 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.09■□□□□ 0.01
CCND1P24385 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.09■□□□□ 0.01
CCND1P24385 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.09■□□□□ 0.01
CCND1P24385 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.09■□□□□ 0.01
CCND1P24385 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CCND1P24385 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
CCND1P24385 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.09■□□□□ 0.01
CCND1P24385 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCND1P24385 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms