Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP1P11387 AC013726.1-201ENST00000563747 2285 ntBASIC17.52■□□□□ 0.4
TOP1P11387 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.52■□□□□ 0.4
TOP1P11387 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TOP1P11387 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.52■□□□□ 0.4
TOP1P11387 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TOP1P11387 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.52■□□□□ 0.4
TOP1P11387 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.52■□□□□ 0.4
TOP1P11387 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TOP1P11387 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TOP1P11387 BTBD6P1-201ENST00000412176 1267 ntBASIC17.52■□□□□ 0.4
TOP1P11387 AC079178.1-201ENST00000420915 656 ntBASIC17.52■□□□□ 0.4
TOP1P11387 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 MTX1P1-201ENST00000440904 838 ntBASIC17.52■□□□□ 0.4
TOP1P11387 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.52■□□□□ 0.4
TOP1P11387 RPSAP36-202ENST00000494591 1261 ntBASIC17.52■□□□□ 0.4
TOP1P11387 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TOP1P11387 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.52■□□□□ 0.4
TOP1P11387 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.52■□□□□ 0.4
TOP1P11387 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.52■□□□□ 0.4
TOP1P11387 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.52■□□□□ 0.4
TOP1P11387 AC007686.3-201ENST00000619017 3487 ntBASIC17.52■□□□□ 0.4
TOP1P11387 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP1P11387 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TOP1P11387 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.52■□□□□ 0.4
TOP1P11387 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TOP1P11387 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP1P11387 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP1P11387 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TOP1P11387 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.52■□□□□ 0.39
TOP1P11387 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.52■□□□□ 0.39
TOP1P11387 AC020910.5-201ENST00000623668 1865 ntBASIC17.52■□□□□ 0.39
TOP1P11387 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP1P11387 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TOP1P11387 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TOP1P11387 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP1P11387 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TOP1P11387 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.51■□□□□ 0.39
TOP1P11387 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.51■□□□□ 0.39
TOP1P11387 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.51■□□□□ 0.39
TOP1P11387 HIST2H2BB-201ENST00000449108 381 ntBASIC17.51■□□□□ 0.39
TOP1P11387 PFN1P12-201ENST00000455938 534 ntBASIC17.51■□□□□ 0.39
TOP1P11387 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 AC108725.1-201ENST00000495472 409 ntBASIC17.51■□□□□ 0.39
TOP1P11387 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.51■□□□□ 0.39
TOP1P11387 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
TOP1P11387 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 MIR4683-201ENST00000579659 81 ntBASIC17.51■□□□□ 0.39
TOP1P11387 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.51■□□□□ 0.39
TOP1P11387 AC091271.1-201ENST00000611877 1162 ntBASIC17.51■□□□□ 0.39
TOP1P11387 AC244157.2-201ENST00000616239 1006 ntBASIC17.51■□□□□ 0.39
TOP1P11387 MIR6869-201ENST00000619434 62 ntBASIC17.51■□□□□ 0.39
TOP1P11387 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TOP1P11387 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP1P11387 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.5■□□□□ 0.39
TOP1P11387 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.5■□□□□ 0.39
TOP1P11387 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.5■□□□□ 0.39
TOP1P11387 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
TOP1P11387 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TOP1P11387 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TOP1P11387 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TOP1P11387 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
TOP1P11387 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TOP1P11387 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.5■□□□□ 0.39
TOP1P11387 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.5■□□□□ 0.39
TOP1P11387 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms