Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 KRT8P14-201ENST00000414254 1442 ntBASIC12.43□□□□□ -0.42
CTSDP07339 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CTSDP07339 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CTSDP07339 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CTSDP07339 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 AL591122.2-201ENST00000624125 1853 ntBASIC12.42□□□□□ -0.42
CTSDP07339 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 AC093525.8-201ENST00000624099 1342 ntBASIC12.42□□□□□ -0.42
CTSDP07339 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 AL645937.2-201ENST00000396808 931 ntBASIC12.42□□□□□ -0.42
CTSDP07339 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.42□□□□□ -0.42
CTSDP07339 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
CTSDP07339 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.42□□□□□ -0.42
CTSDP07339 AC112482.1-201ENST00000492080 688 ntBASIC12.42□□□□□ -0.42
CTSDP07339 GAPDHP40-201ENST00000505218 1006 ntBASIC12.42□□□□□ -0.42
CTSDP07339 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.42□□□□□ -0.42
CTSDP07339 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.42□□□□□ -0.42
CTSDP07339 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.42□□□□□ -0.42
CTSDP07339 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.42□□□□□ -0.42
CTSDP07339 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 MIR4453-201ENST00000584019 89 ntBASIC12.42□□□□□ -0.42
CTSDP07339 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 MIR6074-201ENST00000612054 107 ntBASIC12.42□□□□□ -0.42
CTSDP07339 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 ELL2P1-201ENST00000413990 1906 ntBASIC12.42□□□□□ -0.42
CTSDP07339 AC099521.3-201ENST00000624251 2938 ntBASIC12.42□□□□□ -0.42
CTSDP07339 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.42□□□□□ -0.42
CTSDP07339 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.42□□□□□ -0.42
CTSDP07339 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CTSDP07339 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CTSDP07339 CICP16-201ENST00000502609 2813 ntBASIC12.42□□□□□ -0.42
CTSDP07339 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CTSDP07339 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTSDP07339 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CTSDP07339 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms