Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBB4AP04350 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBB4AP04350 RPL13AP23-201ENST00000480739 586 ntBASIC16.02■□□□□ 0.16
TUBB4AP04350 RNA5SP415-201ENST00000517246 115 ntBASIC16.02■□□□□ 0.16
TUBB4AP04350 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.02■□□□□ 0.16
TUBB4AP04350 SLC25A1P1-201ENST00000528351 927 ntBASIC16.02■□□□□ 0.16
TUBB4AP04350 KRT18P8-201ENST00000581937 1246 ntBASIC16.02■□□□□ 0.16
TUBB4AP04350 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBB4AP04350 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBB4AP04350 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TUBB4AP04350 HSPA8P5-201ENST00000456928 2069 ntBASIC16.02■□□□□ 0.15
TUBB4AP04350 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBB4AP04350 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBB4AP04350 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBB4AP04350 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBB4AP04350 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBB4AP04350 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBB4AP04350 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBB4AP04350 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBB4AP04350 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBB4AP04350 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.02■□□□□ 0.15
TUBB4AP04350 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
TUBB4AP04350 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TUBB4AP04350 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBB4AP04350 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TUBB4AP04350 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBB4AP04350 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TUBB4AP04350 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBB4AP04350 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBB4AP04350 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.01■□□□□ 0.15
TUBB4AP04350 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TUBB4AP04350 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.01■□□□□ 0.15
TUBB4AP04350 AL645937.2-201ENST00000396808 931 ntBASIC16.01■□□□□ 0.15
TUBB4AP04350 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBB4AP04350 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBB4AP04350 IGHV3-62-201ENST00000520057 340 ntBASIC16.01■□□□□ 0.15
TUBB4AP04350 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBB4AP04350 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TUBB4AP04350 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBB4AP04350 AC243562.1-201ENST00000560672 389 ntBASIC16.01■□□□□ 0.15
TUBB4AP04350 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.01■□□□□ 0.15
TUBB4AP04350 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.01■□□□□ 0.15
TUBB4AP04350 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TUBB4AP04350 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TUBB4AP04350 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TUBB4AP04350 AGAP10P-201ENST00000454844 2418 ntBASIC16.01■□□□□ 0.15
TUBB4AP04350 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBB4AP04350 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.01■□□□□ 0.15
TUBB4AP04350 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBB4AP04350 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBB4AP04350 AC135782.3-201ENST00000562782 2105 ntBASIC16.01■□□□□ 0.15
TUBB4AP04350 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TUBB4AP04350 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBB4AP04350 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16■□□□□ 0.15
TUBB4AP04350 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16■□□□□ 0.15
TUBB4AP04350 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TUBB4AP04350 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16■□□□□ 0.15
TUBB4AP04350 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TUBB4AP04350 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TUBB4AP04350 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TUBB4AP04350 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TUBB4AP04350 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TUBB4AP04350 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16■□□□□ 0.15
TUBB4AP04350 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16■□□□□ 0.15
TUBB4AP04350 DLX4-206ENST00000611342 1662 ntBASIC16■□□□□ 0.15
TUBB4AP04350 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC16■□□□□ 0.15
TUBB4AP04350 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16■□□□□ 0.15
TUBB4AP04350 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16■□□□□ 0.15
TUBB4AP04350 KRT18P64-201ENST00000434946 1219 ntBASIC16■□□□□ 0.15
TUBB4AP04350 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16■□□□□ 0.15
TUBB4AP04350 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16■□□□□ 0.15
TUBB4AP04350 IGHV3-22-201ENST00000520721 359 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms