Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 AC099336.1-201ENST00000417053 1171 ntBASIC11.54□□□□□ -0.56
TRBV12-3P01733 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 AC133552.6-201ENST00000613406 534 ntBASIC11.54□□□□□ -0.56
TRBV12-3P01733 MIR6805-201ENST00000615055 62 ntBASIC11.54□□□□□ -0.56
TRBV12-3P01733 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 AHCYP2-201ENST00000430630 1300 ntBASIC11.54□□□□□ -0.56
TRBV12-3P01733 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.54□□□□□ -0.56
TRBV12-3P01733 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TRBV12-3P01733 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.53□□□□□ -0.56
TRBV12-3P01733 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 HLA-V-201ENST00000429037 534 ntBASIC11.53□□□□□ -0.56
TRBV12-3P01733 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 KRT223P-202ENST00000449164 1292 ntBASIC11.53□□□□□ -0.56
TRBV12-3P01733 COX5BP1-201ENST00000507622 393 ntBASIC11.53□□□□□ -0.56
TRBV12-3P01733 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 HNRNPA1P48-202ENST00000565308 961 ntBASIC11.53□□□□□ -0.56
TRBV12-3P01733 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 MIR4683-201ENST00000579659 81 ntBASIC11.53□□□□□ -0.56
TRBV12-3P01733 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.53□□□□□ -0.56
TRBV12-3P01733 COX11-210ENST00000639671 696 ntBASIC11.53□□□□□ -0.56
TRBV12-3P01733 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRBV12-3P01733 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms