Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 CICP16-201ENST00000502609 2813 ntBASIC13.37□□□□□ -0.27
CDRT1O95170 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CDRT1O95170 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.37□□□□□ -0.27
CDRT1O95170 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.37□□□□□ -0.27
CDRT1O95170 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.37□□□□□ -0.27
CDRT1O95170 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 MKNK2P1-201ENST00000437526 628 ntBASIC13.37□□□□□ -0.27
CDRT1O95170 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.37□□□□□ -0.27
CDRT1O95170 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 KRT18P58-201ENST00000527480 1120 ntBASIC13.37□□□□□ -0.27
CDRT1O95170 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 BANF1P1-201ENST00000553684 263 ntBASIC13.37□□□□□ -0.27
CDRT1O95170 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.37□□□□□ -0.27
CDRT1O95170 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.37□□□□□ -0.27
CDRT1O95170 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.37□□□□□ -0.27
CDRT1O95170 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 AC083964.2-201ENST00000623988 2396 ntBASIC13.37□□□□□ -0.27
CDRT1O95170 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 MIR497HG-202ENST00000572453 3838 ntBASIC13.37□□□□□ -0.27
CDRT1O95170 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDRT1O95170 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDRT1O95170 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDRT1O95170 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.36□□□□□ -0.27
CDRT1O95170 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDRT1O95170 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDRT1O95170 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CDRT1O95170 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.36□□□□□ -0.27
CDRT1O95170 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
CDRT1O95170 KRT18P32-201ENST00000424695 1287 ntBASIC13.36□□□□□ -0.27
CDRT1O95170 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 CEND1P1-201ENST00000451006 455 ntBASIC13.36□□□□□ -0.27
CDRT1O95170 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.36□□□□□ -0.27
CDRT1O95170 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CDRT1O95170 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.36□□□□□ -0.27
CDRT1O95170 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.36□□□□□ -0.27
CDRT1O95170 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.36□□□□□ -0.27
CDRT1O95170 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
CDRT1O95170 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CDRT1O95170 AC022145.2-201ENST00000598203 171 ntBASIC13.36□□□□□ -0.27
CDRT1O95170 MTDHP5-201ENST00000598980 586 ntBASIC13.36□□□□□ -0.27
CDRT1O95170 AC025181.2-201ENST00000606994 802 ntBASIC13.36□□□□□ -0.27
CDRT1O95170 AC003101.2-201ENST00000612557 442 ntBASIC13.36□□□□□ -0.27
CDRT1O95170 AC018529.1-201ENST00000613063 361 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms