Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14□□□□□ -0.17
TRIM3O75382 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 FGD5P1-202ENST00000614866 2498 ntBASIC14□□□□□ -0.17
TRIM3O75382 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRIM3O75382 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14□□□□□ -0.17
TRIM3O75382 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM3O75382 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM3O75382 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 MIR1909-201ENST00000411312 80 ntBASIC13.99□□□□□ -0.17
TRIM3O75382 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 AC114812.1-204ENST00000449669 728 ntBASIC13.99□□□□□ -0.17
TRIM3O75382 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.99□□□□□ -0.17
TRIM3O75382 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 AC106760.1-201ENST00000508690 800 ntBASIC13.99□□□□□ -0.17
TRIM3O75382 KRT18P25-201ENST00000508931 1278 ntBASIC13.99□□□□□ -0.17
TRIM3O75382 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM3O75382 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM3O75382 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 SAMD11P1-201ENST00000571429 661 ntBASIC13.99□□□□□ -0.17
TRIM3O75382 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.99□□□□□ -0.17
TRIM3O75382 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 AC023024.2-201ENST00000623561 1993 ntBASIC13.99□□□□□ -0.17
TRIM3O75382 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM3O75382 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM3O75382 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.99□□□□□ -0.17
TRIM3O75382 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM3O75382 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRIM3O75382 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM3O75382 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM3O75382 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM3O75382 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 WASH3P-207ENST00000560956 1394 ntBASIC13.98□□□□□ -0.17
TRIM3O75382 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
TRIM3O75382 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRIM3O75382 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRIM3O75382 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRIM3O75382 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM3O75382 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM3O75382 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM3O75382 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms