Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC239800.4-201ENST00000603712 296 ntBASIC13.3□□□□□ -0.28
TRAF3IP2O43734 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 AC007191.1-201ENST00000623179 2995 ntBASIC13.3□□□□□ -0.28
TRAF3IP2O43734 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 FKBP4P6-201ENST00000457486 1332 ntBASIC13.3□□□□□ -0.28
TRAF3IP2O43734 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAF3IP2O43734 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 INE2-201ENST00000630399 1874 ntBASIC13.29□□□□□ -0.28
TRAF3IP2O43734 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 KRT43P-201ENST00000434019 910 ntBASIC13.29□□□□□ -0.28
TRAF3IP2O43734 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 TPT1P11-201ENST00000458482 498 ntBASIC13.29□□□□□ -0.28
TRAF3IP2O43734 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 GCOM2-201ENST00000509133 1104 ntBASIC13.29□□□□□ -0.28
TRAF3IP2O43734 AC022447.6-201ENST00000515522 438 ntBASIC13.29□□□□□ -0.28
TRAF3IP2O43734 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 AC106820.3-201ENST00000561653 397 ntBASIC13.29□□□□□ -0.28
TRAF3IP2O43734 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 AC020910.5-201ENST00000623668 1865 ntBASIC13.29□□□□□ -0.28
TRAF3IP2O43734 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 AP000593.2-201ENST00000542775 1433 ntBASIC13.29□□□□□ -0.28
TRAF3IP2O43734 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAF3IP2O43734 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC097359.2-201ENST00000604992 2389 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAF3IP2O43734 AC092135.3-201ENST00000624151 1846 ntBASIC13.28□□□□□ -0.28
TRAF3IP2O43734 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms