Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.78□□□□□ -0.2
DENRO43583 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.78□□□□□ -0.2
DENRO43583 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.78□□□□□ -0.2
DENRO43583 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.78□□□□□ -0.2
DENRO43583 SLED1-202ENST00000512051 380 ntBASIC13.78□□□□□ -0.2
DENRO43583 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.78□□□□□ -0.2
DENRO43583 AF238378.1-201ENST00000526806 358 ntBASIC13.78□□□□□ -0.2
DENRO43583 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.78□□□□□ -0.2
DENRO43583 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.78□□□□□ -0.2
DENRO43583 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.78□□□□□ -0.2
DENRO43583 AC010507.1-201ENST00000633895 436 ntBASIC13.78□□□□□ -0.2
DENRO43583 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.78□□□□□ -0.2
DENRO43583 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.78□□□□□ -0.2
DENRO43583 KRT8P14-201ENST00000414254 1442 ntBASIC13.78□□□□□ -0.2
DENRO43583 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
DENRO43583 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.78□□□□□ -0.2
DENRO43583 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DENRO43583 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
DENRO43583 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DENRO43583 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.78□□□□□ -0.2
DENRO43583 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DENRO43583 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DENRO43583 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
DENRO43583 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DENRO43583 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DENRO43583 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
DENRO43583 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.77□□□□□ -0.2
DENRO43583 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.77□□□□□ -0.2
DENRO43583 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 AKR1C7P-201ENST00000305623 895 ntBASIC13.77□□□□□ -0.21
DENRO43583 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.77□□□□□ -0.21
DENRO43583 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.77□□□□□ -0.21
DENRO43583 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
DENRO43583 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 HLA-H-201ENST00000383620 1096 ntBASIC13.77□□□□□ -0.21
DENRO43583 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.77□□□□□ -0.21
DENRO43583 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
DENRO43583 FAM210CP-201ENST00000445714 574 ntBASIC13.77□□□□□ -0.21
DENRO43583 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.77□□□□□ -0.21
DENRO43583 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.77□□□□□ -0.21
DENRO43583 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.77□□□□□ -0.21
DENRO43583 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.77□□□□□ -0.21
DENRO43583 AC092364.2-202ENST00000597012 1073 ntBASIC13.77□□□□□ -0.21
DENRO43583 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
DENRO43583 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.77□□□□□ -0.21
DENRO43583 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DENRO43583 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.77□□□□□ -0.21
DENRO43583 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms