Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.98□□□□□ -0.01
SMAD6O43541 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SMAD6O43541 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.98□□□□□ -0.01
SMAD6O43541 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.98□□□□□ -0.01
SMAD6O43541 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.98□□□□□ -0.01
SMAD6O43541 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.98□□□□□ -0.01
SMAD6O43541 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.98□□□□□ -0.01
SMAD6O43541 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.98□□□□□ -0.01
SMAD6O43541 AC104073.2-201ENST00000453737 312 ntBASIC14.98□□□□□ -0.01
SMAD6O43541 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.98□□□□□ -0.01
SMAD6O43541 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.98□□□□□ -0.01
SMAD6O43541 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SMAD6O43541 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.98□□□□□ -0.01
SMAD6O43541 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 AL023803.2-201ENST00000620080 638 ntBASIC14.98□□□□□ -0.01
SMAD6O43541 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SMAD6O43541 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.98□□□□□ -0.01
SMAD6O43541 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SMAD6O43541 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.98□□□□□ -0.01
SMAD6O43541 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SMAD6O43541 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SMAD6O43541 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SMAD6O43541 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 LINC02228-204ENST00000642115 2962 ntBASIC14.97□□□□□ -0.01
SMAD6O43541 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 DPM3-202ENST00000368399 517 ntBASIC14.97□□□□□ -0.01
SMAD6O43541 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 RPL18P13-201ENST00000478088 569 ntBASIC14.97□□□□□ -0.01
SMAD6O43541 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 AC005324.6-201ENST00000587972 613 ntBASIC14.97□□□□□ -0.01
SMAD6O43541 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.97□□□□□ -0.01
SMAD6O43541 MIR6720-201ENST00000611664 98 ntBASIC14.97□□□□□ -0.01
SMAD6O43541 Z98259.2-201ENST00000641583 609 ntBASIC14.97□□□□□ -0.01
SMAD6O43541 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.97□□□□□ -0.01
SMAD6O43541 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SMAD6O43541 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SMAD6O43541 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.97□□□□□ -0.01
SMAD6O43541 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.97□□□□□ -0.01
SMAD6O43541 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.96□□□□□ -0.01
SMAD6O43541 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SMAD6O43541 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.96□□□□□ -0.01
SMAD6O43541 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
SMAD6O43541 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.96□□□□□ -0.01
SMAD6O43541 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SMAD6O43541 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.96□□□□□ -0.01
SMAD6O43541 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
SMAD6O43541 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.96□□□□□ -0.01
SMAD6O43541 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.96□□□□□ -0.01
SMAD6O43541 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.96□□□□□ -0.01
SMAD6O43541 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SMAD6O43541 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.96□□□□□ -0.01
SMAD6O43541 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SMAD6O43541 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms