Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.27□□□□□ -0.77
NDUFA1O15239 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
NDUFA1O15239 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.27□□□□□ -0.77
NDUFA1O15239 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.27□□□□□ -0.77
NDUFA1O15239 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
NDUFA1O15239 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.27□□□□□ -0.77
NDUFA1O15239 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.27□□□□□ -0.77
NDUFA1O15239 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC10.27□□□□□ -0.77
NDUFA1O15239 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.27□□□□□ -0.77
NDUFA1O15239 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC10.27□□□□□ -0.77
NDUFA1O15239 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC10.27□□□□□ -0.77
NDUFA1O15239 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.27□□□□□ -0.77
NDUFA1O15239 MIR4469-201ENST00000583919 79 ntBASIC10.27□□□□□ -0.77
NDUFA1O15239 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.27□□□□□ -0.77
NDUFA1O15239 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.27□□□□□ -0.77
NDUFA1O15239 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
NDUFA1O15239 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
NDUFA1O15239 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.27□□□□□ -0.77
NDUFA1O15239 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
NDUFA1O15239 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.26□□□□□ -0.77
NDUFA1O15239 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC10.26□□□□□ -0.77
NDUFA1O15239 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 CETN4P-206ENST00000642099 2168 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.26□□□□□ -0.77
NDUFA1O15239 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.26□□□□□ -0.77
NDUFA1O15239 OR2I1P-208ENST00000641137 4948 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 AC073548.1-201ENST00000624088 1882 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 AC073957.3-201ENST00000609998 6758 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.26□□□□□ -0.77
NDUFA1O15239 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 RPL30-202ENST00000396070 440 ntTSL 2 BASIC10.26□□□□□ -0.77
NDUFA1O15239 AC004461.1-201ENST00000412461 403 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 TARDBPP1-201ENST00000442013 1203 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.26□□□□□ -0.77
NDUFA1O15239 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.26□□□□□ -0.77
NDUFA1O15239 AC023141.5-201ENST00000458585 616 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.26□□□□□ -0.77
NDUFA1O15239 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC10.26□□□□□ -0.77
NDUFA1O15239 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.26□□□□□ -0.77
NDUFA1O15239 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.26□□□□□ -0.77
NDUFA1O15239 AL589739.1-201ENST00000607720 493 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
NDUFA1O15239 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.26□□□□□ -0.77
NDUFA1O15239 HOTTIP_1.1-201ENST00000620415 57 ntBASIC10.26□□□□□ -0.77
NDUFA1O15239 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
NDUFA1O15239 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC10.26□□□□□ -0.77
NDUFA1O15239 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms