Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.39□□□□□ -0.11
SLC28A1O00337 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.39□□□□□ -0.11
SLC28A1O00337 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 DFFBP1-201ENST00000433250 979 ntBASIC14.39□□□□□ -0.11
SLC28A1O00337 EIF3FP3-201ENST00000434851 1086 ntBASIC14.39□□□□□ -0.11
SLC28A1O00337 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC28A1O00337 AC123567.1-201ENST00000548294 1261 ntBASIC14.39□□□□□ -0.11
SLC28A1O00337 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.39□□□□□ -0.11
SLC28A1O00337 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC28A1O00337 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SLC28A1O00337 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC28A1O00337 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 AC041040.2-201ENST00000622926 2899 ntBASIC14.39□□□□□ -0.11
SLC28A1O00337 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC28A1O00337 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 AC003102.2-201ENST00000589195 1469 ntBASIC14.38□□□□□ -0.11
SLC28A1O00337 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 AC138969.2-201ENST00000532739 9932 ntBASIC14.38□□□□□ -0.11
SLC28A1O00337 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.38□□□□□ -0.11
SLC28A1O00337 AL391825.1-201ENST00000457671 1364 ntBASIC14.38□□□□□ -0.11
SLC28A1O00337 AL136172.1-201ENST00000598590 1394 ntBASIC14.38□□□□□ -0.11
SLC28A1O00337 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SLC28A1O00337 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SLC28A1O00337 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
SLC28A1O00337 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC28A1O00337 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC28A1O00337 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 TMEM261P1-201ENST00000604899 340 ntBASIC14.38□□□□□ -0.11
SLC28A1O00337 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC28A1O00337 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SLC28A1O00337 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SLC28A1O00337 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms