Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.14□□□□□ -0.31
TRDV1A0A1B0GX56 HLA-A-201ENST00000376802 1334 ntBASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AC093525.8-201ENST00000624099 1342 ntBASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AL645937.2-201ENST00000396808 931 ntBASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 KRT18P56-201ENST00000507275 550 ntBASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRDV1A0A1B0GX56 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 AC011498.7-201ENST00000624986 2027 ntBASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 AL591424.1-201ENST00000442569 1213 ntBASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 GAPDHP40-201ENST00000505218 1006 ntBASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 DMBT1P1-203ENST00000636837 4628 ntBASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TRDV1A0A1B0GX56 AL158070.2-201ENST00000623713 1621 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms