Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
AP4B1Q9Y6B7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.83■■□□□ 1.09
AP4B1Q9Y6B7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
AP4B1Q9Y6B7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
AP4B1Q9Y6B7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.83■■□□□ 1.09
AP4B1Q9Y6B7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
AP4B1Q9Y6B7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
AP4B1Q9Y6B7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
AP4B1Q9Y6B7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.83■■□□□ 1.08
AP4B1Q9Y6B7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
AP4B1Q9Y6B7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
AP4B1Q9Y6B7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
AP4B1Q9Y6B7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 AC018755.3-202ENST00000596210 929 ntBASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AP4B1Q9Y6B7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 TSPY13P-201ENST00000338964 914 ntBASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 AC004987.1-201ENST00000428627 508 ntBASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 ATP5G2P3-201ENST00000429083 425 ntBASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.8■■□□□ 1.08
AP4B1Q9Y6B7 DUX4L9-201ENST00000449051 1259 ntBASIC21.79■■□□□ 1.08
AP4B1Q9Y6B7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AP4B1Q9Y6B7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AP4B1Q9Y6B7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
AP4B1Q9Y6B7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
AP4B1Q9Y6B7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
AP4B1Q9Y6B7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
AP4B1Q9Y6B7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.78■■□□□ 1.08
AP4B1Q9Y6B7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.78■■□□□ 1.08
AP4B1Q9Y6B7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.78■■□□□ 1.08
AP4B1Q9Y6B7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.78■■□□□ 1.08
AP4B1Q9Y6B7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP4B1Q9Y6B7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP4B1Q9Y6B7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
AP4B1Q9Y6B7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
AP4B1Q9Y6B7 MIR6765-201ENST00000614092 87 ntBASIC21.77■■□□□ 1.08
AP4B1Q9Y6B7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
AP4B1Q9Y6B7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.77■■□□□ 1.07
AP4B1Q9Y6B7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 SPCS2P3-201ENST00000500401 656 ntBASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AP4B1Q9Y6B7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 KRT18P10-201ENST00000388836 1287 ntBASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 AL033527.3-201ENST00000566366 1196 ntBASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 C1orf229-201ENST00000623686 2258 ntBASIC21.75■■□□□ 1.07
AP4B1Q9Y6B7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
AP4B1Q9Y6B7 LINC00526-201ENST00000581067 1875 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms