Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 SP2-202ENST00000613139 908 ntTSL 5 BASIC25■■□□□ 1.59
PCDHA11Q9Y5I1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
PCDHA11Q9Y5I1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA11Q9Y5I1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25■■□□□ 1.59
PCDHA11Q9Y5I1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHA11Q9Y5I1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
PCDHA11Q9Y5I1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 AL137784.2-201ENST00000607332 1000 ntBASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHA11Q9Y5I1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA11Q9Y5I1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA11Q9Y5I1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.97■■□□□ 1.59
PCDHA11Q9Y5I1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHA11Q9Y5I1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.97■■□□□ 1.59
PCDHA11Q9Y5I1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA11Q9Y5I1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA11Q9Y5I1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.96■■□□□ 1.59
PCDHA11Q9Y5I1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA11Q9Y5I1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA11Q9Y5I1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHA11Q9Y5I1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
PCDHA11Q9Y5I1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
PCDHA11Q9Y5I1 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.95■■□□□ 1.59
PCDHA11Q9Y5I1 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.95■■□□□ 1.59
PCDHA11Q9Y5I1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
PCDHA11Q9Y5I1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA11Q9Y5I1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
PCDHA11Q9Y5I1 AC092803.2-201ENST00000564287 1899 ntBASIC24.95■■□□□ 1.58
PCDHA11Q9Y5I1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA11Q9Y5I1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHA11Q9Y5I1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA11Q9Y5I1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA11Q9Y5I1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA11Q9Y5I1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA11Q9Y5I1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA11Q9Y5I1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA11Q9Y5I1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHA11Q9Y5I1 DUSP8P4-201ENST00000399538 1761 ntBASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 AC136469.2-201ENST00000623944 1028 ntBASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHA11Q9Y5I1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
PCDHA11Q9Y5I1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 KRT18P5-201ENST00000436075 1291 ntBASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 AC233992.3-201ENST00000607491 485 ntBASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHA11Q9Y5I1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA11Q9Y5I1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA11Q9Y5I1 SLC47A1P1-202ENST00000449666 945 ntBASIC24.9■■□□□ 1.58
PCDHA11Q9Y5I1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDHA11Q9Y5I1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA11Q9Y5I1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHA11Q9Y5I1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHA11Q9Y5I1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA11Q9Y5I1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHA11Q9Y5I1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHA11Q9Y5I1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHA11Q9Y5I1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDHA11Q9Y5I1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDHA11Q9Y5I1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDHA11Q9Y5I1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms