Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGA2Q9Y5H1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA2Q9Y5H1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA2Q9Y5H1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA2Q9Y5H1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGA2Q9Y5H1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA2Q9Y5H1 SLC47A1P1-202ENST00000449666 945 ntBASIC23.21■■□□□ 1.31
PCDHGA2Q9Y5H1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHGA2Q9Y5H1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGA2Q9Y5H1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 AC099791.2-201ENST00000605725 427 ntBASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGA2Q9Y5H1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHGA2Q9Y5H1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA2Q9Y5H1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHGA2Q9Y5H1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA2Q9Y5H1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.19■■□□□ 1.3
PCDHGA2Q9Y5H1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGA2Q9Y5H1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA2Q9Y5H1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGA2Q9Y5H1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHGA2Q9Y5H1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PCDHGA2Q9Y5H1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGA2Q9Y5H1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
PCDHGA2Q9Y5H1 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHGA2Q9Y5H1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGA2Q9Y5H1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 ID1-201ENST00000376105 1233 ntBASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 KRT18P5-201ENST00000436075 1291 ntBASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 AC091060.1-201ENST00000623524 1766 ntBASIC23.17■■□□□ 1.3
PCDHGA2Q9Y5H1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA2Q9Y5H1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA2Q9Y5H1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 AC092803.2-201ENST00000564287 1899 ntBASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 AC136469.2-201ENST00000623944 1028 ntBASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA2Q9Y5H1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
PCDHGA2Q9Y5H1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGA2Q9Y5H1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGA2Q9Y5H1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGA2Q9Y5H1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGA2Q9Y5H1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGA2Q9Y5H1 AC233992.3-201ENST00000607491 485 ntBASIC23.14■■□□□ 1.29
PCDHGA2Q9Y5H1 AC092437.1-201ENST00000624794 1048 ntBASIC23.14■■□□□ 1.29
PCDHGA2Q9Y5H1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.14■■□□□ 1.29
PCDHGA2Q9Y5H1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGA2Q9Y5H1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 YBX1P1-201ENST00000445822 960 ntBASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA2Q9Y5H1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA2Q9Y5H1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA2Q9Y5H1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms