Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHGB3Q9Y5G1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB3Q9Y5G1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB3Q9Y5G1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHGB3Q9Y5G1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGB3Q9Y5G1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB3Q9Y5G1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB3Q9Y5G1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGB3Q9Y5G1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
PCDHGB3Q9Y5G1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PCDHGB3Q9Y5G1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGB3Q9Y5G1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHGB3Q9Y5G1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PCDHGB3Q9Y5G1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB3Q9Y5G1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
PCDHGB3Q9Y5G1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHGB3Q9Y5G1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGB3Q9Y5G1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHGB3Q9Y5G1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGB3Q9Y5G1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 AC009299.2-201ENST00000482477 511 ntBASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 AC103724.3-201ENST00000564481 992 ntBASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGB3Q9Y5G1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 AL031848.2-201ENST00000607670 837 ntBASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 AC079834.2-201ENST00000609776 1949 ntBASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHGB3Q9Y5G1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PCDHGB3Q9Y5G1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHGB3Q9Y5G1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB3Q9Y5G1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB3Q9Y5G1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHGB3Q9Y5G1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGB3Q9Y5G1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB3Q9Y5G1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
PCDHGB3Q9Y5G1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHGB3Q9Y5G1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHGB3Q9Y5G1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 AL161729.1-201ENST00000604104 1402 ntBASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHGB3Q9Y5G1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHGB3Q9Y5G1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms