Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF11Q9Y3C5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF11Q9Y3C5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF11Q9Y3C5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF11Q9Y3C5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF11Q9Y3C5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF11Q9Y3C5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF11Q9Y3C5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RNF11Q9Y3C5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.27■■□□□ 1.16
RNF11Q9Y3C5 AC010980.1-201ENST00000587192 1142 ntBASIC22.27■■□□□ 1.16
RNF11Q9Y3C5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF11Q9Y3C5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 DUSP8P5-201ENST00000422884 1815 ntBASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF11Q9Y3C5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 AC074183.2-201ENST00000623112 922 ntBASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF11Q9Y3C5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 AC012354.3-201ENST00000623734 483 ntBASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF11Q9Y3C5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 AL033527.3-201ENST00000566366 1196 ntBASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF11Q9Y3C5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 AC120024.1-201ENST00000562672 995 ntBASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF11Q9Y3C5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF11Q9Y3C5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF11Q9Y3C5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF11Q9Y3C5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RNF11Q9Y3C5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
RNF11Q9Y3C5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF11Q9Y3C5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF11Q9Y3C5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF11Q9Y3C5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF11Q9Y3C5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.2■■□□□ 1.14
RNF11Q9Y3C5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RNF11Q9Y3C5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RNF11Q9Y3C5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 AL161729.1-201ENST00000604104 1402 ntBASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF11Q9Y3C5 AL022069.1-201ENST00000568025 1636 ntBASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms