Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXA2Q9Y261 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXA2Q9Y261 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
FOXA2Q9Y261 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FOXA2Q9Y261 AL161729.1-201ENST00000604104 1402 ntBASIC18.49■□□□□ 0.55
FOXA2Q9Y261 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.48■□□□□ 0.55
FOXA2Q9Y261 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.48■□□□□ 0.55
FOXA2Q9Y261 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FOXA2Q9Y261 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FOXA2Q9Y261 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXA2Q9Y261 MIR4508-201ENST00000584178 70 ntBASIC18.47■□□□□ 0.55
FOXA2Q9Y261 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXA2Q9Y261 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
FOXA2Q9Y261 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.47■□□□□ 0.55
FOXA2Q9Y261 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
FOXA2Q9Y261 KRT8P33-201ENST00000508125 1423 ntBASIC18.47■□□□□ 0.55
FOXA2Q9Y261 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXA2Q9Y261 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXA2Q9Y261 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FOXA2Q9Y261 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXA2Q9Y261 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXA2Q9Y261 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXA2Q9Y261 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
FOXA2Q9Y261 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXA2Q9Y261 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXA2Q9Y261 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
FOXA2Q9Y261 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXA2Q9Y261 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXA2Q9Y261 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXA2Q9Y261 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXA2Q9Y261 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXA2Q9Y261 AC103834.1-201ENST00000520383 144 ntBASIC18.41■□□□□ 0.54
FOXA2Q9Y261 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
FOXA2Q9Y261 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
FOXA2Q9Y261 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXA2Q9Y261 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXA2Q9Y261 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXA2Q9Y261 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXA2Q9Y261 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
FOXA2Q9Y261 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXA2Q9Y261 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXA2Q9Y261 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXA2Q9Y261 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXA2Q9Y261 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXA2Q9Y261 AC011551.1-201ENST00000614101 683 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms