Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 ABCB10P4-201ENST00000566803 2184 ntBASIC26.26■■□□□ 1.79
PCDHA4Q9UN74 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 MIR6722-201ENST00000617286 78 ntBASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 ALDH1A3-203ENST00000557963 1670 ntBASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PCDHA4Q9UN74 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA4Q9UN74 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 TSPY9P-201ENST00000440215 945 ntBASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 TSPY11P-201ENST00000442607 1045 ntBASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 UNC93B8-201ENST00000511903 705 ntBASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA4Q9UN74 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA4Q9UN74 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PCDHA4Q9UN74 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA4Q9UN74 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA4Q9UN74 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA4Q9UN74 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHA4Q9UN74 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
PCDHA4Q9UN74 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHA4Q9UN74 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHA4Q9UN74 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA4Q9UN74 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA4Q9UN74 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA4Q9UN74 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA4Q9UN74 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA4Q9UN74 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA4Q9UN74 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.2■■□□□ 1.78
PCDHA4Q9UN74 MTDHP2-201ENST00000601468 714 ntBASIC26.2■■□□□ 1.78
PCDHA4Q9UN74 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA4Q9UN74 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 AC010997.5-201ENST00000609182 354 ntBASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA4Q9UN74 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA4Q9UN74 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA4Q9UN74 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA4Q9UN74 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHA4Q9UN74 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
PCDHA4Q9UN74 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDHA4Q9UN74 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms